CONFOCALMICROSCOPY Archives

September 2019

CONFOCALMICROSCOPY@LISTS.UMN.EDU

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From:
Benjamin Smith <[log in to unmask]>
Reply To:
Confocal Microscopy List <[log in to unmask]>
Date:
Thu, 12 Sep 2019 01:25:36 -0700
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Hey Microscopists,

To save everyone the significant amount of search time it took me, if
anyone ever needs a 3D model of an adult mouse for their CAD designs, you
can get a great 3D image stack of one from the Digimouse project:
https://neuroimage.usc.edu/neuro/Digimouse_Download

You can then take the 3D CT image and load it into FIJI -> binarize the
stack and render an isosurface -> export the isosurface as a wavefront
object -> load the wavefront file into MeshLab and scale and translate the
image accordingly and add the desired shader ->Export the MeshLab surface
as a *.wrl file and voila, 3D mouse!

If you want to save yourself the trouble, you can get a copy of the *.wrl
file I made for myself here:
https://grabcad.com/library/adult-mouse-model-from-digimouse-ct-image-1

NOTE: the model is fairly unprocessed and still includes the wooden frame
that was supporting the mouse in the original CT image.

Cheers,
   Ben Smith


-- 
Benjamin E. Smith, Ph. D.
Imaging Specialist, Vision Science
University of California, Berkeley
195 Life Sciences Addition
Berkeley, CA  94720-3200
Tel  (510) 642-9712
Fax (510) 643-6791
e-mail: [log in to unmask]
http://vision.berkeley.edu/?page_id=5635 <http://vision.berkeley.edu/>

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