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Date: | Wed, 25 Jun 2014 11:21:35 -0400 |
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*****
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Post images on http://www.imgur.com and include the link in your posting.
*****
I can open a .czi file using the Bioformats importer packaged in Fiji. If you check the “show metadata” box, you can see the timestamp info.
Michael
On Jun 25, 2014, at 11:16 AM, Niko Ehrenfeuchter <[log in to unmask]> wrote:
> *****
> To join, leave or search the confocal microscopy listserv, go to:
> http://lists.umn.edu/cgi-bin/wa?A0=confocalmicroscopy
> Post images on http://www.imgur.com and include the link in your posting.
> *****
>
> Dear Michael,
>
>
>> I overlooked that the files from the Zeiss 710 have a .lsm extension and files from the 700 have a .czi extension. So Zeiss changed the file format.
>
> this depends on the version of the Zeiss software you're using, iirc.
>
>
>> If anyone knows how we can get the timing information out of the .czi format it would be greatly appreciated.
>
> Have you tried with the latest version of BioFormats, e.g. by a fresh copy of Fiji? There were a lot of changes and bug fixes recently done by the developers...
>
> Cheers
> ~Niko
>
>
> --
> Niko Ehrenfeuchter
> Imaging Core Facility
> Kragenbau, Room G1055
> Biozentrum, University of Basel
> Klingelbergstrasse 50/70
> CH-4056 Basel (Switzerland)
>
> Office: +41 (61) 26 72673
> Email: [log in to unmask]
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