Search the CONFOCAL archive at
http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
Dear all,
to simplify the discussion I would say that we should consider three
cases:
1) when an image is altered to allow a better representation and these
changes are decleared
2) when an image is altered to appear better, but actually at the end
really misrepresent the original data
3) when an image is willingly altered or forged to demonstrate something
not real
I do understand your concern because to fight 3) and minimize 2) we all
aspect that the majority of us (hopefully 1) will be damaged. Let say, like
for the health and safety offices, created to the benefit of the
researchers, often they do not improve (real) safety, but obstacle our work.
Modifying pictures as you all described in comparison also with older
methods should be just fine and should be fine also to delcare it. For
instance if you make ratiometric imaging, you will surely mask the
background and rescale the data... it is obvious and this will be clear
also by material and methods.
On the other hand, if you have immunocytochemistry and you treshold the
background and alter non-linearly the contrast, you will hide the
specificity of the stain. Therefore, beside forensic imaging that somehow
compromizes the relation of trust that there should be between scientists
and editors, what is missing is training of people. Courses about ethics in
science and, specifically, about image processing should be more common,
but they aren't.
Now, what about the people that willingly alter their data? Who forge data
will be always protected in the peer-review. The point is that you do not
have to alter the image, you clealy can alter even tha sample!! Reviewers
and editors should judge manuscrpits in the assumption that are not forged.
It is the scientific community that by reproducing the experiments will
judge that work and, if will be clearly false, the authors will pay the
consequences.
Why people modify images too much (2) or unethically (3)?
First (2), if you are from an unknown lab and you have a dark spot on a gel
you are sure to be criticized for the low quality of the image (although
the data is there and real). Often, the problem is that nowadays the
researcher thinks "who cares then I have photoshop". However, equally
often, it is impossible to obtain a perfect image and you have just to live
with that. In this case, editors should not consider reviewers that ask for
a better image otherwise the authors are obliged to use post-processing
when not scientifically needed, just to improve the esthetics and risking
to cover unwillingly some important details.
In brief, editors should try to defend authors from non fair comments of
reviewers more often, because the attitude of a large part of the reviewers
is to kill a manuscript, another part is "ok, I do not want to read it so
publish it" and fortunately there is another part that is trying to help
authors and editors to improve it. (you write the fractions :) )
Second, people publish forged data or unwillingly alter the meaning of the
data because want to rush their publication because of the peer-review
cycle in science. Again, who forges from scratch their data is
undetectable, they are criminal and soon or late the scientific community
will discover them, so why bother.
For all the others, yes we should pay more attention, as authors, group
leaders, reviewers and editors. However, there is a bug in the system. You
need to publish often and on high impact factor journals to get a grant,
you need a grant to publish. It takes years to make a good (really good)
scientific work, but do you really have that time, considering also that
you could get a paper published in a month, a grant in three months, but
often you need a year for each of the proceses? In my opinion, the peer-
review process of articles is almost fine, I would really like just 1)
faster reviewing (though Nature is fast already) in all journals (1 month);
2) editors that kick asses (sorry for the expression) of bad reviewers.
Therefore I am ciritc to the peer-review for funding. I started only
recently to write grants and it is a ridicolous world. When a funding
agency (practically) asks to predict your future findings, to predict that
you will save the world from a disease or a natural catastroph, the system
becomes morally corrupted at the source. ok, sorry, I am going away from
the point, but I want to make another example.
A group leader has 10 PhD students on the same project and want to publish
only on Nature. Who will be the first author of that nature paper? Or the
honest and genius student, or the lucky one, or the one that makes of any
autofluorescence a good GFP signal. Of that 10 students, the one that cheat
will be awarded, the genius one will go ahead anyway, and it does not
matter if the other 8 are good or bad, they are out from science. The group
leader will publish his Nature, that it will grant a part of the money to
get other 10 PhD students and make carrier...
When after 10 years the paper will be retracted by the senior author now
dean of the university) accusing the PhD student or young post-doc to have
caused the problem, all will be fairly fixed, will be?
I apology for the long opinion on the topic :)
In brief:
1) post-processing is fine whenever declared, but should be used not just
for trivial esthetic purpuses (but we do)
2) more lectures should be given at universities on this specific propblem
for PhD students and any other researcher that is new to the imaging world.
3) faster and simiplified peer-review processes for journal and funding
would help always science and also on this aspect
4) try to punish and not reward the wrong behaviour of authors, reviewers,
group leaders and editors... each of them has its fault in the system-
science
Cheers,
Alessandro
Laser Analytics Group - University of Cambridge (UK)
http://home.quantitative-microscopy.org
|