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August 2018

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From:
"Frohlich, Victoria" <[log in to unmask]>
Reply To:
Confocal Microscopy List <[log in to unmask]>
Date:
Tue, 21 Aug 2018 12:33:22 +0000
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*****
To join, leave or search the confocal microscopy listserv, go to:
http://lists.umn.edu/cgi-bin/wa?A0=confocalmicroscopy
Post images on http://www.imgur.com and include the link in your posting.
*****

Try CF405 from Biotium.
Bright and robust
Vickie

Sent from my iPhone

> On Aug 21, 2018, at 7:32 AM, Jeff Carmichael <[log in to unmask]> wrote:
>
> *****
> To join, leave or search the confocal microscopy listserv, go to:
> https://na01.safelinks.protection.outlook.com/?url=http%3A%2F%2Flists.umn.edu%2Fcgi-bin%2Fwa%3FA0%3Dconfocalmicroscopy&amp;data=01%7C01%7Cvictoria.frohlich%40STJUDE.ORG%7Cbcb327d3a8c04f89a37d08d60759c94f%7C22340fa892264871b677d3b3e377af72%7C0&amp;sdata=nSw2ovbXMvqk%2FgJG38PxRboLuMklces9f59Bz4mNH6s%3D&amp;reserved=0
> Post images on https://na01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.imgur.com&amp;data=01%7C01%7Cvictoria.frohlich%40STJUDE.ORG%7Cbcb327d3a8c04f89a37d08d60759c94f%7C22340fa892264871b677d3b3e377af72%7C0&amp;sdata=wAIon1cmiOBqtzyqbG7pC6CvL7Vmq4vAqMncvjfBeb8%3D&amp;reserved=0 and include the link in your posting.
> *****
>
> This has been addressed more than once in the listserv, but below are some
> resources to look into the BrilliantViolet fluorophores which are much more
> than an order of magnitude brighter than AF405. You could potentially add
> two additional channels in this spectral "dead zone".
>
> Chroma Technology has no commercial interest in these fluorophores, only in
> the filter sets we've recommended for detecting them.
>
> https://na01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jacksonimmuno.com%2Ftechnical%2Fproducts%2Fconjugate-selection%2Fbrilliant-violet&amp;data=01%7C01%7Cvictoria.frohlich%40STJUDE.ORG%7Cbcb327d3a8c04f89a37d08d60759c94f%7C22340fa892264871b677d3b3e377af72%7C0&amp;sdata=LdLt%2BA8lXuru65UJ7hIkPFu8NBLix5ImMzQd9rvTYj4%3D&amp;reserved=0
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>
> Good luck and please share your results!
> Jeff
>
> *Jeff Carmichael*
> *Product & Technical Marketing Manager*
>
> *[log in to unmask] <[log in to unmask]> | 802-428-2528*
>
> * <[log in to unmask]>*
>
> On Mon, Aug 20, 2018 at 7:06 PM, Cromey, Douglas W - (dcromey) <
> [log in to unmask]> wrote:
>
>> *****
>> To join, leave or search the confocal microscopy listserv, go to:
>> https://na01.safelinks.protection.outlook.com/?url=http%3A%2F%2Flists.umn.edu%2Fcgi-bin%2Fwa%3FA0%3Dconfocalmicroscopy&amp;data=01%7C01%7Cvictoria.frohlich%40STJUDE.ORG%7Cbcb327d3a8c04f89a37d08d60759c94f%7C22340fa892264871b677d3b3e377af72%7C0&amp;sdata=nSw2ovbXMvqk%2FgJG38PxRboLuMklces9f59Bz4mNH6s%3D&amp;reserved=0
>> Post images on https://na01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.imgur.com&amp;data=01%7C01%7Cvictoria.frohlich%40STJUDE.ORG%7Cbcb327d3a8c04f89a37d08d60759c94f%7C22340fa892264871b677d3b3e377af72%7C0&amp;sdata=wAIon1cmiOBqtzyqbG7pC6CvL7Vmq4vAqMncvjfBeb8%3D&amp;reserved=0 and include the link in your posting.
>> *****
>>
>> Is there a better or preferred "blue" fluorochrome? Mostly this is a
>> widefield fluorescence question (using a DAPI cube), but there is the
>> possibility for using a confocal with a 405nm laser line.
>>
>> I'm working with a group that is trying to work around a frustrating
>> autofluorescence issue in liver tissue. What we ended up doing on an
>> earlier project was not using any secondaries that fluoresced in the green
>> channel (no fitc/AF488/GFP) and instead used the green channel on our
>> widefield microscope as a control, ratioing this image so we could subtract
>> it out of the other channels to remove some of the broad autofluorescent
>> background. This worked nicely. In the published images we showed nuclei
>> (blue) and two specific stains using AF568 and AF647, with reduced
>> background autofluorescence.
>>
>> The PI now wants to have labelling with three specific fluorochromes, and
>> I am advocating using the green channel as the generic "everything lights
>> up" channel for context, so we can hopefully skip the Hoechst 3342 or DAPI.
>> Since we won't be using DNA dyes, is there a good blue fluorochrome that
>> can be used as a secondary for specific labelling of a marker found on an
>> intracellular organelle (other than the nucleus)?
>>
>> Thanks,
>> Doug
>>
>> ------------------------------------------------------------
>> ------------------------------
>> Douglas W. Cromey, M.S. - Associate Scientific Investigator
>> Dept. of Cellular & Molecular Medicine, University of Arizona
>> 1501 N. Campbell Ave, Tucson, AZ  85724-5044 USA
>>
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