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Does anybody know about an automated program to combine multiple
physical sections (say 100 micron thick) of the same sample (say 10 mm
in diameter and 10 mm long)  to create a single 3D object (10 mm in
diameter and 10 mm long). Each section is imaged with confocal
microscopy with high resolution, so the whole 3D object is rendered
with the same high resolution.

Thanks in advance.
I. Coman