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Search the CONFOCAL archive at
http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
DIAS has two different cell outline methods
(gradient and threshold) and the gradient method
works very well with DIC images. Dave
>Search the CONFOCAL archive at
>http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
>
>Hi Gabor,
>
>As you said, most segmentation and tracking
>software assumes bright features on a dark
>background (or vice versa), which causes
>problems for DIC images.
>
>AutoDeblur has a DIC Restoration function that
>converts DIC images to an optical path length
>representation. The results show cells as
>bright features on a dark background. You can
>then use with your favourite segmentation and
>tracking software on the resulting image
>sequence. A 30 day trial of AutoDeblur and the
>DIC Restoration is available at www.aqi.com.
>
>AutoQuant also has a new Cell Counting and
>Tracking module that is currently in beta and
>will be released shortly.
>
>If anyone is interested in DIC processing, please feel free to contact me.
>
>Cheers,
>David
>---
>David Biggs, PhD
>Senior Research Scientist
>AutoQuant Imaging, Inc.
>[log in to unmask]
>
>
>-----Original Message-----
>From: Csucs Gabor [mailto:[log in to unmask]]
>Sent: Friday, January 23, 2004 5:33 AM
>To: [log in to unmask]
>Subject: Re: motion tracking
>
>
>Search the CONFOCAL archive at
>http://listserv.acsu.buffalo.edu/cgi-bin/wa?S1=confocal
>
>Dear All
>
>It is quite true that there are a number of softwares with which one can
>perform tracking. My main problem is that for the segmentation of the
>images these usually use tresholding which may work nicely for
>fluorescent images but fails often when phase contrast images of cell
>should be tracked. So my question is whether anyone is aware of a
>software with which one can automatically track phase contrast (or DIC)
>images of cells with minimal operator interference. Obviously in this
>case only in 2D...
>
>Thanks Gabor
>
>--
>Gabor Csucs, PhD
>Light Microscopy Center
>Institute of Biochemistry
>Swiss Federal Institute of Technology, ETHZ
>
>tel +41 1 633 6221
> +41 1 633 6196 ETH Hönngerberg
>fax +41 1 633 1124 CH-8093 Zürich
>email [log in to unmask]
>www http://www.biol.ethz.ch
--
Dr. David Knecht
Department of Molecular and Cell Biology
University of Connecticut
91 N. Eagleville Rd. U-3125
Storrs, CT 06269-3125
[log in to unmask]
860-486-2200 860-486-4331 (fax)
home page: http://www.sp.uconn.edu/~mcbstaff/knecht/knecht.html
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