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Date: | Sun, 25 Jan 2004 19:02:18 -0600 |
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>Dear All
>
>It is quite true that there are a number of softwares with which one can
>perform tracking. My main problem is that for the segmentation of the
>images these usually use tresholding which may work nicely for
>fluorescent images but fails often when phase contrast images of cell
>should be tracked. So my question is whether anyone is aware of a
>software with which one can automatically track phase contrast (or DIC)
>images of cells with minimal operator interference. Obviously in this
>case only in 2D...
>
>Thanks Gabor
>
>--
>Gabor Csucs, PhD
>Light Microscopy Center
>Institute of Biochemistry
>Swiss Federal Institute of Technology, ETHZ
>
>tel +41 1 633 6221
> +41 1 633 6196 ETH Hönngerberg
>fax +41 1 633 1124 CH-8093 Zürich
>email [log in to unmask]
>www http://www.biol.ethz.ch
Dear Gabor,
I am not aware of such software.
My suggestion is that you don't use Phase-Contrast (or DIC for that matter).
If you want a single image that will show you RI
changes, use dark field. I know that doing this
as NA >1 is difficult but I think that you will
find that an NA 1.0 lens will give you a better
and more easily interpretable image in dark field
than a 1.2 NA phase of DIC setup on most living
specimens.
(doesn't work well on thick specimens with a lot
of "out-of-focus" scattered light.)
Jim P.
--
****************************************
Prof. James B. Pawley, Ph. 608-263-3147
Room 223, Zoology Research Building, FAX 608-265-5315
1117 Johnson Ave., Madison, WI, 53706 [log in to unmask]
"A scientist is not one who can answer questions but one who can
question answers." Theodore Schick Jr., Skeptical Enquirer, 21-2:39
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