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August 2010

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Confocal Microscopy List <[log in to unmask]>
Date:
Fri, 6 Aug 2010 13:59:49 -0600
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Confocal Microscopy List <[log in to unmask]>
Subject:
Re: Wavelength to RGB coversion
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From:
Craig Brideau <[log in to unmask]>
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Our ImageTrak software can handle spectral data and display in RGB.

http://www.ucalgary.ca/styslab/imagetrak

It is Mac only though.

Craig


On Fri, Aug 6, 2010 at 1:21 PM, G. Esteban Fernandez
<[log in to unmask]> wrote:
> I have 4D (xyz + lambda/spectral) stacks from a Zeiss 710 confocal that I
> need to render in 3D, with the lambda dimension pseudocolored in RGB.
> Zeiss AIM/LSM and ZEN software do not render 3D volumes of lambda-colored
> z-stacks or even export series of lambda-colored planes to TIFF (I'd have to
> do 'em one by one) so I'm going to color each channel according to
> wavelength using ImageJ's Image5D format.  Might there be an ImageJ plugin
> or other software that reads the metadata and does this automatically?
>
> Thanks,
> Esteban

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